Pharmaceutical quality scientist in a lab coat, hairnet and gloves checking a blister pack beside a packaging line of white medicine boxes
    Healthcare / Pharmaceutical

    Pharmaceutical software development

    Pharma teams run on systems that must prove who did what and when: adverse event intake, batch and quality records, serialization, and field tools for medical affairs. Agnotic Technologies builds this software for pharmaceutical companies, with 21 CFR Part 11 audit trails and validation evidence designed in.

    Part 11
    Audit trails and electronic signatures
    DSCSA
    Package-level product tracing
    15 days
    Serious, unexpected adverse events to FDA

    Trusted by global innovators

    Benchmark
    Chibasco
    Fundency
    Lantimer
    Lauren
    Lera
    One Minute
    Pento Pix
    TAP
    Xtrium
    Healthevolve
    Benchmark
    Chibasco
    Fundency
    Lantimer
    Lauren
    Lera
    One Minute
    Pento Pix
    TAP
    Xtrium
    Healthevolve
    Benchmark
    Chibasco
    Fundency
    Lantimer
    Lauren
    Lera
    One Minute
    Pento Pix
    TAP
    Xtrium
    Healthevolve
    Benchmark
    Chibasco
    Fundency
    Lantimer
    Lauren
    Lera
    One Minute
    Pento Pix
    TAP
    Xtrium
    Healthevolve
    Industry Overview

    What is pharmaceutical software development?

    Pharmaceutical software development is building the systems a pharmaceutical company runs outside the clinic: pharmacovigilance intake, quality and batch records, serialization and traceability, and commercial and medical affairs tools. Agnotic Technologies builds these systems for pharma teams as a services engagement, with 21 CFR Part 11 audit trails, validation evidence and data integration designed in from the first release.

    Who we build for

    Which pharma teams ask us for custom software?

    Each function in a pharmaceutical company has its own records, its own regulator-facing deadlines and its own gaps between packaged systems.

    Pharmacovigilance and drug safety

    Teams that receive, triage and report adverse events.

    • Intake forms for call centers, field reps and patients
    • Case triage with seriousness and expectedness flags
    • Deadline tracking for 15-day alert reports

    Quality and manufacturing

    QA and operations teams working under CGMP rules.

    • Deviation and CAPA tracking
    • Batch record review and release workflow
    • Training and document control

    Supply chain and serialization

    Teams responsible for DSCSA product tracing.

    • Product identifier capture at pack and case level
    • Transaction data exchange with trading partners
    • Illegitimate product investigation and notification

    Commercial and medical affairs

    Field and HQ teams that work with HCPs and payers.

    • HCP engagement and medical information request tools
    • Sample management and spend records
    • Market access and formulary trackers
    Industry Challenges

    Where do pharma systems usually break?

    Failure points we see most often when a pharmaceutical company audits its own software landscape.

    • Audit trail gaps: a record can be edited without a who, when and why, so it cannot be relied on in an inspection.

    • Spreadsheet handoffs: adverse event data moves from intake to the safety database by email, and deadlines are tracked by hand.

    • Unvalidated changes: a configuration change ships without a documented test, and the validated state is lost.

    • Serialization islands: the packaging line, the ERP and the trading partner portal each hold a different version of the product trace.

    • Field tools without controls: reps capture HCP interactions in consumer apps with no retention or access rules.

    Decision table

    Which rules apply to each pharma system?

    Not every system in a pharmaceutical company is a GxP system. This table is how we decide, on the scoping call, which controls a build needs.

    Pharmaceutical system types and the rules that shape their design
    SystemGoverning rulesWhat the software must doValidation depth
    Pharmacovigilance intake21 CFR 314.80, 21 CFR Part 11Capture cases, flag serious and unexpected events, track the 15-day clockFull: audit trail, e-signatures, test evidence
    Batch and quality records21 CFR Part 211, 21 CFR Part 11Record complete data, back it up, check inputs and outputsFull
    Serialization and tracingDSCSAHold product identifiers and transaction data, support 24-hour illegitimate product noticesFull for tracing data
    Medical information requestsInternal SOPs, privacy lawLog requests and responses, control accessModerate: access and retention controls
    HCP engagement and field toolsPrivacy law, company policyRecord interactions, enforce spend and sample rulesModerate
    Internal analytics and reportingDepends on the data sourceRead from validated systems without altering themLight, unless used for GxP decisions
    Our Approach

    How do we build GxP-aligned software?

    Controls are design decisions, not a document written at the end. These are the ones every regulated build gets.

    Audit trail by default

    Every create, update and delete on a regulated record stores who, when, the previous value and the reason.

    Electronic signatures

    Signature meaning, re-authentication and signer identity on records that need them, per 21 CFR Part 11.

    Validation evidence as you go

    Requirements, risk assessment, test scripts and traceability written during the build, so the validated state is documented, not reconstructed.

    Capabilities

    What we build for pharmaceutical companies

    Common systems, each delivered as a fixed-scope first release that can grow.

    Adverse event intake

    Web, mobile and call-center intake with seriousness triage and handoff to your safety database.

    Quality management workflows

    Deviations, CAPA, change control and training records with approval chains.

    DSCSA traceability

    Product identifier capture, transaction data exchange and investigation records for suspect product.

    Medical affairs tools

    Medical information request handling, standard response libraries and HCP interaction logs.

    Commercial data integration

    Pipelines that bring CRM, sample, spend and market data into one governed model.

    Patient support program apps

    Enrollment, adherence reminders and hub services, with HIPAA safeguards where PHI is involved.

    Engineering Stack

    Technologies we use for pharma builds

    Chosen for traceability, long support windows and fit with your existing platforms.

    Records and signatures

    PostgreSQLEvent-sourced audit logPKI-backed e-signatures

    Integration

    REST and GraphQL APIsSFTP and AS2 exchangeEPCIS for serialization data

    Apps

    Next.jsReact NativeSwiftKotlin

    Cloud

    AWSAzureGoogle Cloud
    Measured Impact

    What drives the cost of pharmaceutical software?

    There is no fixed price. These are the factors that move effort most, and we size each on the scoping call.

    Validation
    Depth of CSV or CSA evidence

    A GxP system needs requirements, risk assessment, test scripts and traceability; a reporting tool needs far less.

    Integrations
    Systems to connect

    Safety databases, ERP, CRM, document management and trading partner exchanges each add interface work.

    Signatures
    Records needing e-signatures

    Each signature point adds meaning text, re-authentication and signer records.

    Migration
    Legacy data to move

    Historical cases, batch records and trace data must be migrated with their audit history intact.

    My Lauren Maternal Health Platform | Built by Agnotic

    A HIPAA-ready maternal health platform enabling remote patient monitoring, care coordination, and personalized engagement from pre-pregnancy through postpartum.

    Case Study
    My Lauren Maternal Health Platform | Built by Agnotic
    LERA Health: Compliant Women’s Health App Platform

    LERA Health: Compliant Women’s Health App Platform

    A women’s health product experience focused on guided care journeys, education, and compliance-aware workflows to support long-term engagement.

    Case Study
    Use Cases

    Where does custom pharma software pay off first?

    First releases we scope most often with pharmaceutical teams and pharmaceutical startups.

    01

    Adverse event intake portal

    One intake path for call center, field and patient reports, with the 15-day clock visible from receipt.

    02

    Deviation and CAPA tracker

    Replaces a spreadsheet with an approval workflow and an audit trail.

    03

    DSCSA exception handling

    A queue for mismatched or missing trace data, with investigation records and notification support.

    04

    Medical information desk

    Request logging, standard responses and reporting for medical affairs.

    05

    Field data capture

    Mobile tools for reps and MSLs with retention and access rules built in.

    06

    Commercial data platform

    A governed data model that replaces competing spreadsheets across sales, access and marketing.

    Integrations

    Which systems do pharma builds connect to?

    The platforms a pharmaceutical company usually already runs.

    Pharmacovigilance

    Safety databases

    Manufacturing

    ERP and MES

    Quality

    Electronic document management

    Commercial

    CRM

    Supply chain

    Serialization and EPCIS repositories

    Security

    Identity providers (SSO)
    Self-assessment

    Validation checklist for a new pharma system

    What we agree with your quality team before the first release of any GxP-impacting system. Use it to check a vendor, too.

    Before the build

    Before the build

    During the build

    During the build

    Before go-live

    Before go-live

    Compliance-First Development Services Backed by Global Standards

    We build secure, scalable products designed for privacy, interoperability, and regulatory readiness from day one across every sector we serve.

    HIPAA logo

    Health Insurance Portability and Accountability Act

    Protect PHI with privacy-first architecture, encrypted storage and transmission, and strict access controls.

    Our Edge

    Why Global Leaders Choose Us

    We combine deep technical expertise with industry-specific knowledge to deliver solutions that aren't just functional, but transformational.

    Enterprise-Grade Security

    We implement rigorous security protocols and compliance standards (HIPAA, GDPR, SOC2) across all industrial solutions to protect sensitive data.

    High-Performance Scaling

    Our architectures are built to handle massive data loads and user bases, keeping performance steady whether you're serving ten or ten million.

    Accelerated Time-to-Market

    Using our suite of internal tools and proven frameworks, we reduce development cycles and get your product to market 40% faster.

    Embedded AI Integration

    Beyond simple wrappers, we build deep-learning integrations and predictive analytics directly into the core of your industry-specific workflows.

    Engagement Model

    How does a pharma engagement work?

    Timing depends on scope and validation depth. We agree a fixed first release on the scoping call.

    01

    Scoping call

    We agree the system, its users, the rules that apply and the systems it must connect to.

    02

    Requirements and risk

    User requirements and a risk assessment reviewed with your quality team.

    03

    Fixed-scope first release

    One workflow built with weekly demos, audit trail and test evidence from the first sprint.

    04

    Validation and go-live

    Executed test scripts, traceability and a change control procedure handed over with the release.

    05

    Support and change control

    Later releases follow the same documented path, so the system stays validated.

    Facts and sources

    Rules behind pharmaceutical software

    Facts we design around, each linked to its primary source.

    • 21 CFR Part 11 sets FDA's requirements for electronic records and electronic signatures, including secure, computer-generated audit trails.

      Source: 21 CFR Part 11 (eCFR)
    • Under 21 CFR 314.80, an applicant must report each adverse drug experience that is both serious and unexpected to FDA as soon as possible and no later than 15 calendar days from initial receipt of the information.

      Source: 21 CFR 314.80 (eCFR)
    • 21 CFR 211.68 requires that computers used in drug manufacturing have input and output checked for accuracy and that a backup file of entered data is maintained, secure from alteration, inadvertent erasure or loss.

      Source: 21 CFR 211.68 (eCFR)
    • The Drug Supply Chain Security Act sets out steps toward an electronic, interoperable system to identify and trace certain prescription drugs at the package level, and trading partners must notify FDA within 24 hours of determining that a product is illegitimate.

      Source: FDA, Drug Supply Chain Security Act (DSCSA)

    Voice of success

    We don't just build products; we forge lasting partnerships. See how we've helped industry leaders transform their vision into technical reality.

    Benchmark

    “I can clearly see how Agnotic has a unique way of handling end-to-end development. They are always active on quick chat and provide support quickly.”

    Aaron Phelan

    Aaron Phelan

    Founder, Benchmark

    Latimer

    “Agnotic combines deep technical expertise with strong domain knowledge. They understand the business context, anticipate challenges, and make collaboration smooth and effective.”

    John Pasmore

    John Pasmore

    Founder, Latimer

    My Lauren

    “Agnotic is the best technical team we evaluated. Their engineering excellence made our work dramatically easier and allowed us to stay focused on what matters most for maternal care outcomes. They took full ownership of the technical execution, and we are always happy to continue working together.”

    Kim Smith

    Kim Smith

    Founder, My Lauren

    Related pages

    Related services for pharma teams

    Detailed pages for the work that usually sits next to a pharma build.

    Cross-Industry Reach

    The Same Engineering Patterns, Across Other Industries

    The technical patterns behind this platform translate naturally into adjacent verticals.

    Frequently Asked Questions

    It depends on scope, the number of integrations and the validation depth the system needs. We agree a fixed-scope first release on the scoping call and give you its timeline before work starts.