How does HPC integration work?

Direct integration with Slurm, Kubernetes, and cloud HPC options. Data-proximate compute avoids the cost of moving petabytes across networks.

How do you preserve reproducibility?

Every dataset, every access, and every transformation is versioned with cryptographic lineage — reproducibility is baked in, not bolted on.

Gov & Research / National Scientific Data Repository

National Scientific Data Repository

We engineer secure, petabyte-scale data repositories that let research institutions and government programs share data across organizations without compromising privacy, integrity, or sovereignty.

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Petabyte+

Per repository deployment

Federated

Cross-institution access with hard isolation

Immutable

Cryptographic audit trails

Trusted by global innovators

Industry Overview

National Scientific Data Repository: Engineered End-to-End

Science scales when data scales. We build the data infrastructure that lets universities, labs, and government programs collaborate at petabyte scale — with the security, sovereignty, and access controls that make funders and regulators comfortable.

Industry Challenges

What Stops Most Teams From Solving This Today

Common friction points we hear from gov & research teams scoping this kind of platform.

Cross-Institution Silos: Collaborating labs can't share data safely without building custom one-off pipelines.
HPC Bottlenecks: Data movement to and from HPC clusters becomes the limiting factor in research cycles.
Reproducibility Gaps: Without versioning and lineage, published results can't be reproduced years later.
Funder Reporting: Data management plan reporting is manual, painful, and incomplete.

Our Approach

Our Engineering Approach

We engineer for the operational reality — not the demo.

Federated Architecture

Federated access across institutions with hard isolation at the data layer.

HPC-Native Integration

Direct integration with Slurm, Kubernetes, and major HPC schedulers.

Immutable Lineage

Cryptographic lineage from raw data through every analysis step.

Capabilities

Production-grade features the platform ships with from day one.

Petabyte-Scale Storage

Object storage and tiered archive for long-term data preservation.

Federated Access

Cross-institution access with local authentication and hard isolation.

HPC Integration

Slurm, Kubernetes, and major HPC scheduler integration.

Immutable Audit

Cryptographic audit trails over every access and transformation.

DOI & Citation

Automated DOI minting and citation support for datasets.

Versioning & Lineage

Dataset versioning with full transformation lineage.

Funder Reporting

Automated data management plan reporting for grants.

Researcher Workspaces

Jupyter and RStudio workspaces with data-proximate compute.

How It Works

Reference Architecture

How data and decisions flow end-to-end.

Ingest & Archive

Petabyte-scale ingest with automated tiering to cold storage.

Federation Layer

Cross-institution federation with local identity and isolation.

HPC Compute Layer

Integration with Slurm, Kubernetes, and cloud HPC options.

Lineage & Provenance

Immutable lineage across every transformation and access.

Apps & Reporting

Researcher workspaces, funder reporting, and administrative consoles.

Engineering Stack

Technology Stack

A pragmatic stack chosen for reliability, speed, and ease of operation.

Storage

Apache IcebergS3MinIOCeph

Compute

SlurmKubernetesNextflowSnakemake

Federation

OIDCGlobusCILogon

Backend

PythonGoPostgreSQL

Apps

Next.jsJupyterHubRStudio Server

Infra

KubernetesVaultTerraform

Measured Impact

Quantified outcomes from production deployments.

Petabyte+

Per repository deployment

Federated

Cross-institution access

Immutable

Audit and lineage

HPC-native

Compute integration

National Genomics & Climate Data Program

A national research initiative needed a shared data repository supporting genomics and climate research across universities, national labs, and international partners.

The system supports petabytes of data with HPC integration, has accelerated multiple research breakthroughs, and serves as a model for future national data programs.

Case Study

National Genomics & Climate Data Program

Use Cases

Where This Earns Its Keep

Common deployment patterns we see across customers.

Genomics Data Sharing

Cross-institution genomics data sharing with HPC compute.

Climate Research

Climate model data hosting and federated analysis.

Public Health Research

Secure longitudinal health data for research with privacy preservation.

High-Energy Physics

Petabyte-scale physics experiment data hosting.

Social Science Research

Secure survey and behavioral data hosting with access controls.

National Security Research

Accredited research environments with air-gapped isolation.

Integrations

Integrates With Your Existing Stack

We connect to the systems your teams already know.

Federation

Globus

Compute

JupyterHub

HPC

Slurm

Identity

ORCID

DOI

DataCite

DMP

DMPRoadmap

Compliance-First Development Services Backed by Global Standards

We build secure, scalable products designed for privacy, interoperability, and regulatory readiness from day one across every sector we serve.

General Data Protection Regulation

Implement lawful consent flows, data minimization, and secure processing for global data privacy.

Service Organization Control 2

Verified controls for security, availability, and confidentiality of enterprise data systems.

Information Security Management

Adhering to the international gold standard for managing information security risks.

Our Edge

Why Global Leaders Choose Us

We combine deep technical expertise with industry-specific knowledge to deliver solutions that aren't just functional, but transformational.

Enterprise-Grade Security

We implement rigorous security protocols and compliance standards (HIPAA, GDPR, SOC2) across all industrial solutions to protect sensitive data.

High-Performance Scaling

Our architectures are built to handle massive data loads and user bases, ensuring seamless performance whether you're serving ten or ten million.

Accelerated Time-to-Market

Leveraging our suite of internal tools and proven frameworks, we reduce development cycles and get your product to market 40% faster.

Embedded AI Integration

Beyond simple wrappers, we build deep-learning integrations and predictive analytics directly into the core of your industry-specific workflows.

Engagement Model

Predictable, structured delivery from kickoff through long-term ownership.

Discovery & Scoping

We map the existing systems, constraints, and stakeholders to scope a focused 8–12 week first delivery.

Architecture & Pilot

A working slice on a representative environment — proving the data flow end-to-end before scaling.

Production Engineering

Hardened services, observability, access controls, and audit logging go live behind your IAM.

Operate & Iterate

We stay on as the embedded engineering team — closing tickets, tuning models, and shipping new value.

Voices of Success

We don't just build products; we forge lasting partnerships. See how we've helped industry leaders transform their vision into technical reality.

"I can clearly see how Agnotic has a unique way of handling end-to-end development. They are always active on quick chat and provide support quickly."

Aaron Phelan

Founder, Benchmark

"Agnotic is the best technical team we evaluated. Their engineering excellence made our work dramatically easier and allowed us to stay focused on what matters most for maternal care outcomes. They took full ownership of the technical execution, and we are always happy to continue working together."

Kim Smith

Founder, My Lauren

"Agnotic combines deep technical expertise with strong domain knowledge. They understand the business context, anticipate challenges, and make collaboration smooth and effective."